T-Analyst: Efficient analysis of protein conformational changesT-Analyst is a program for analyzing molecular dynamics trajectories based on internal bond-angle-torsion coordinates. The program computes entropy and rotameric states of dihedrals, clusters multiple conformations and detects dihedral rotations that contribute hinge-like motions. T-Analyst was developed with special focuses on showing changes of protein flexibility between different states, and selecting representative protein conformations for molecular docking studies. Download - Source Code, Version 1.1 (updated 2012-03-05) |
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